Ubiquitin thioesterase OTUB1 (B2RYG6)

Uniprot ID B2RYG6
Protein Name Ubiquitin thioesterase OTUB1
Gene Name Otub1
Species Rattus norvegicus (Rat)
Signal peptide(a) N Secretome P(b)
Function Hydrolase that can specifically remove compared to 'Lys-48'-linked conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation. Regulator of T-cell anergy, a phenomenon that occurs when T-cells are rendered unresponsive to antigen rechallenge and no longer respond to their cognate antigen. Acts via its interaction with RNF128/GRAIL. Surprisingly, it regulates RNF128-mediated ubiquitination, but does not deubiquitinate polyubiquitinated RNF128. Deubiquitinates estrogen receptor alpha (ESR1). Mediates deubiquitination of 'Lys-48'-linked polyubiquitin chains, but not 'Lys-63'-linked polyubiquitin chains. Not able to cleave di-ubiquitin. Also capable of removing NEDD8 from NEDD8 conjugates, but with a much lower preference compared to 'Lys-48'-linked ubiquitin (By similarity). .Plays a key non-catalytic role in DNA repair regulation by inhibiting activity of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites. Inhibits RNF168 independently of ubiquitin thioesterase activity by binding and inhibiting UBE2N/UBC13, the E2 partner of RNF168, thereby limiting spreading of 'Lys-63'-linked histone H2A and H2AX marks. Inhibition occurs by binding to free ubiquitin: free ubiquitin acts as an allosteric regulator that increases affinity for UBE2N/UBC13 and disrupts interaction with UBE2V1. The OTUB1-UBE2N/UBC13-free ubiquitin complex adopts a configuration that mimics a cleaved 'Lys48'-linked di-ubiquitin chain (By similarity). {ECO:0000250}.
GO - Molecular function
  • NEDD8-specific protease activity : ISS:UniProtKB
  • thiol-dependent ubiquitin-specific protease activity : ISS:UniProtKB
  • ubiquitin binding : ISS:UniProtKB
  • ubiquitin protein ligase binding : ISO:RGD
GO - Biological process
  • adaptive immune response : IEA:UniProtKB-KW
  • cellular response to DNA damage stimulus : ISS:UniProtKB
  • cellular response to interleukin-1 : IEP:RGD
  • DNA repair : IEA:UniProtKB-KW
  • negative regulation of double-strand break repair : ISS:UniProtKB
  • negative regulation of histone H2A K63-linked ubiquitination : ISS:UniProtKB
  • protein K48-linked deubiquitination : ISS:UniProtKB
Back
(a) The Signal peptide D-score cutoff for "YES"(having signal peptide) is 0.45.
(b) Non-classically secreted proteins should obtain an NN-score(Neural Networks score) exceeding the normal threshold of 0.5, but not at the same time be predicted to contain a signal peptide.