Stromal cell-derived factor 1 (P40224)

Uniprot ID P40224
Protein Name Stromal cell-derived factor 1
Gene Name Cxcl12
Species Mus musculus (Mouse)
Signal peptide(a) Y Secretome P(b) 0.895
Function Chemoattractant active on T-lymphocytes and monocytes but not neutrophils. Activates the C-X-C chemokine receptor CXCR4 to induce a rapid and transient rise in the level of intracellular calcium ions and chemotaxis. Also binds to atypical chemokine receptor ACKR3, which activates the beta-arrestin pathway and acts as a scavenger receptor for SDF-1. Binds to the allosteric site (site 2) of integrins and activates integrins ITGAV:ITGB3, ITGA4:ITGB1 and ITGA5:ITGB1 in a CXCR4-independent manner (By similarity). Acts as a positive regulator of monocyte migration and a negative regulator of monocyte adhesion via the LYN kinase. Stimulates migration of monocytes and T-lymphocytes through its receptors, CXCR4 and ACKR3, and decreases monocyte adherence to surfaces coated with ICAM-1, a ligand for beta-2 integrins. SDF1A/CXCR4 signaling axis inhibits beta-2 integrin LFA-1 mediated adhesion of monocytes to ICAM-1 through LYN kinase. Plays a protective role after myocardial infarction. Induces down-regulation and internalization of ACKR3 expressed in various cells (By similarity). Has several critical functions during embryonic development; required for B-cell lymphopoiesis, myelopoiesis in bone marrow and heart ventricular septum formation. Stimulates the proliferation of bone marrow-derived B-cell progenitors in the presence of IL7 as well as growth of stromal cell-dependent pre-B-cells (PubMed:8134392). .
GO - Molecular function
  • chemoattractant activity : IBA:GO_Central
  • chemokine activity : IDA:MGI
  • chemokine receptor binding : ISS:UniProtKB
  • CXCR chemokine receptor binding : ISO:MGI
  • growth factor activity : IEA:UniProtKB-KW
  • integrin binding : ISS:UniProtKB
GO - Biological process
  • adult locomotory behavior : ISO:MGI
  • ameboidal-type cell migration : IMP:MGI
  • animal organ regeneration : ISO:MGI
  • brain development : IDA:MGI
  • branching involved in blood vessel morphogenesis : IMP:MGI
  • cell chemotaxis : ISO:MGI
  • cell-cell adhesion : IDA:MGI
  • chemokine-mediated signaling pathway : ISO:MGI
  • defense response : IEA:InterPro
  • detection of mechanical stimulus involved in sensory perception of pain : ISO:MGI
  • detection of temperature stimulus involved in sensory perception of pain : ISO:MGI
  • dopaminergic neuron differentiation : IDA:ParkinsonsUK-UCL
  • germ cell development : IDA:MGI
  • germ cell migration : IDA:MGI
  • immune response : IEA:InterPro
  • induction of positive chemotaxis : IDA:MGI
  • integrin activation : ISS:UniProtKB
  • motor neuron axon guidance : IMP:MGI
  • negative regulation of dendritic cell apoptotic process : ISO:MGI
  • negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage : ISO:MGI
  • negative regulation of leukocyte tethering or rolling : ISO:MGI
  • neuron migration : ISO:MGI
  • positive regulation of axon extension involved in axon guidance : ISO:MGI
  • positive regulation of calcium ion import : IDA:MGI
  • positive regulation of cell adhesion : ISO:MGI
  • positive regulation of cell migration : IDA:MGI
  • positive regulation of cell proliferation : ISO:MGI
  • positive regulation of dopamine secretion : ISO:MGI
  • positive regulation of endothelial cell proliferation : ISO:MGI
  • positive regulation of monocyte chemotaxis : ISO:MGI
  • positive regulation of myoblast fusion : IMP:MGI
  • positive regulation of neuron differentiation : ISO:MGI
  • positive regulation of T cell migration : ISO:MGI
  • regulation of calcium ion transport : ISO:MGI
  • regulation of cell migration : IDA:MGI
  • T cell proliferation : IMP:MGI
  • telencephalon cell migration : ISO:MGI
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(a) The Signal peptide D-score cutoff for "YES"(having signal peptide) is 0.45.
(b) Non-classically secreted proteins should obtain an NN-score(Neural Networks score) exceeding the normal threshold of 0.5, but not at the same time be predicted to contain a signal peptide.